cobramod.core
=============

.. py:module:: cobramod.core

.. autoapi-nested-parse::

   Core package

   This sub-package contains the principal modules, which are responsible for the
   creation of COBRApy objects and the addition of Pathway objects into the
   metabolic model. The modules include:

   - creation: Creation of COBRApy objects
   - crossreferences: Storing and retriving crossreferences information to COBRApy
     objects
   - extension: Addition of reactions and metabolites into metabolic models
   - genes: Creation of COBRApy genes
   - graph: Algorithm to build the order of reactions
   - pathway: Creation of :func:`cobra.core.group.Group` child.
   :func:`cobramod.core.pathway.Pathway`.
   - summary: Short and long information about changes



Submodules
----------

.. toctree::
   :maxdepth: 1

   /autoapi/cobramod/core/creation/index
   /autoapi/cobramod/core/crossreferences/index
   /autoapi/cobramod/core/extension/index
   /autoapi/cobramod/core/genes/index
   /autoapi/cobramod/core/graph/index
   /autoapi/cobramod/core/pathway/index
   /autoapi/cobramod/core/summary/index